Until then, BEAGLE 3.3 should be more accurate than PLINK for case/control haplotype association.Ħ: Free database software handles these operations in a more flexible and powerful manner.ħ: Just use gzip/ gunzip for this. Future PLINK versions will be able to import phase and dosage information emitted by other programs the haplotype association commands will be reintroduced when that functionality is in place. We recommend migrating away from PLINK 1 here, but if that's not practical, keep a permanent copy of the PLINK 1.07 binary around and modify the relevant lines of your scripts to explicitly refer to it.ģ: We believe this now has almost no practical value, since the file format it expects is too different from VCF.Ĥ: This was not fully developed in PLINK 1.07, and has been superseded by other IBD analysis packages.ĥ: PLINK's haplotype phasing and imputation algorithms are obsolete.
0 Comments
Leave a Reply. |
Details
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |